Dr.
Mark A. Tapsak
Office 203 HSC – Research Lab 249 Hartline
389-4893, mtapsak@bloomu.edu
Course Materials – Research
Interests
Introduction
There is no substitute for
a good research experience during your education. Although research is a requirement for the
ACS certified Chemistry degree, all science majors should engage in some form
of independent undergraduate research for a variety of reasons. Research can help you:
· Solidify the concepts from
your classes - it provides an example of how scientific information and theory
is applied to the real world.
· Sharpen your laboratory
skills with both equipment and notebooks.
· Decide on a career path -
as compared to lab classes, the experience is much closer to what you will do
daily in industrial jobs and/or graduate school.
· Familiarize yourself with
the science faculty at Bloomsburg and build relationships that can result in
great reference letters.
· Build your resume with good
experience with the potential of authorship on publications.
For Chemistry majors, the
normal track for performing undergraduate research begins after you have
completed Introduction to Scientific Literature, Chem 281, during the spring of
your second year. This class introduces
you to the use of the library and scientific journals for the acquisition of
information for research, proposals, and presentations.
Credit is given for
research performed during the academic year, provided that you enroll in the
appropriate course, Introduction to Research, Chemistry 492 and Chemical
Research, Chemistry 493. These courses
are essentially ongoing research under the guidance of a faculty member. The earliest that you can take Chemistry 492
is during the spring semester of your third year.
However, this
does not mean that you have to wait until your third year to get involved in
research at Bloomsburg! First and second
year students are encouraged to volunteer their time for research. This is an excellent opportunity to find out your
true interests and skills. In addition,
research experience can also help you perform better in upper level laboratory
courses that require techniques that you may have already have mastered. The remainder of this document will highlight
some of the research that will be pursued in my
laboratory. Please feel free to stop by
for more detailed information.
Project Title – Measurement of Creatine
in Blood, Urine and Muscle
Project Objective
The overall
goal of this work is to develop a fast, accurate and cost effective electronic
sensor for creatine and creatinine in blood, urine and muscle samples. The initial objective of this work will be to
develop a membrane-based amperometric sensor and validate its performance with
creatine in human plasma samples.
Background
Approximately 95% of the
body’s creatine is stored in skeletal muscle, where it exists in free (i.e.
creatine) and phosphorylated (i.e. phosphocreatine) form.
During intense physical activity, phosphocreatine
donates its phosphate to adenosine diphosphate to
produce adenosine triphosphate (ATP), so muscle
contractions can be sustained. Brief,
intense, physical activities such as climbing stairs or lifting a heavy weight
rely heavily on the creatine-phosphocreatine energy
system.
It has been
demonstrated that ingestion of creatine supplements by young healthy
individuals of about 20 g/d for 5 days results in approximately a 25% increase
in total muscle creatine. The greater
level of muscle creatine available for energy production results in an improved
ability to perform intense exercise tasks, and in fact, 70% of studies
examining the effects of creatine supplementation on exercise performance
demonstrate an ergogenic (increased strength,
decreased fatigue) effect. Additionally,
individuals who ingest creatine may experience a marked increase in body mass
or lean body mass.
A great deal of information regarding the absorption,
retention, and metabolism of creatine can be gathered from blood, urine and
muscle samples. Unfortunately,
measurement methods for creatine and creatinine suffer from complexity, both in
terms of equipment and labor. Methods
such as HPLC,[1,2] and NMR[3] have been successfully
been used but require expensive analytical equipment. Without this equipment, investigators are
forced to use commercial colorimetric kits that require relatively large sample
volumes for measurement replication.
Typically, these samples must be collected over long time intervals and
frozen for later evaluation in a lab.[4]
The user must prep these samples using good analytical techniques and
precise sample handling. Regrettably,
the sum of these limitations leads researchers to be skeptical of reported
creatine and creatinine data.
While the
measurement of creatine and creatinine has been accomplished by other
researchers using an oxidase enzyme,[5,6] a reusable
membrane-based sensor has not been developed for use in this assay. When such a technology is developed, it will
enjoy several practical advantages over the state of the art.
Examples of project tasks
|
Task |
Skills
Used / Learned |
|
Calibrate H2O2
sensors |
Work with computer controlled
electrochemical sensor, data collection with LabView
software, data work-up with MS Excel. |
|
Stock solution prep |
Using analytical glassware,
prepare stock solutions of H2O2, creatine, phosphate buffers, sarcosine,
ascorbic acid etc. |
|
Run colorimetric test kits |
Use analytical glassware to run
commercial clinical lab test kits for creatine, use spectrophotometer to
measure concentrations. |
|
Prepare polymer membranes for
sensor |
Develop polymer formulations and
prepare sensor membranes. |
Project Title – Development of Wound Responsive Biomaterials
Project Objective
Unfortunately,
current controlled drug release systems do not account for biological
variations or traumatic events to implantable devices beyond their initial
healing periods. They simply deliver the biologically active agents with a
known release rate versus time. In other words, these systems are not
responsive to the environment that they are placed, i.e. host tissues. This
project will begin to address these issues by developing the chemistry that
facilitates a responsive release of drugs from a biomaterial with respect to pH. It is the object of this research to develop a drug-releasing
silicone biomaterial that is responsive to the localized wound-healing
environment by increasing the rate of drug delivery with a decrease in
localized pH. Furthermore, the rate of drug delivery
will decrease or even stop when the local pH returns to more neutral levels. In
this way, a responsive delivery material will not only be useful for the
initial implant period, but such a material would reactivate the release of
bound drug upon reinjury of the implant site.
Background
It has long been
recognized that the materials commonly used to construct implantable medical
devices stimulate an inflammatory response. Upon implantation, all foreign
material is detected as such and a set of responses is triggered in reaction to
the wound and continuous presence of the implanted material. This response can
be divided into two phases. The first phase consists of mobilization of mast
cells and then infiltration of predominantly polymorphonuclear
(PMN) cells. This phase is termed the
acute inflammatory phase. Interestingly, it has been reported that during this
time the localized pH can reach levels as low as six.[7-9]
Over the course
of days to weeks, these cells are replaced by chronic cell types, thus begins
the second phase of inflammation.
Macrophage and lymphocyte cells predominate during this phase.
Ultimately, permanent scar tissue is formed and is called a foreign body
capsule (FBC). The types of cells, their general roles and their orders of
appearance and disappearance in the FBC have been well characterized. During
this second stage the local pH returns to more neutral physiologic levels.
Examples of project tasks
|
Task |
Skills
Used / Learned |
|
Calibrate diffusion cell sensors |
Using analytical glassware, prepare drug solutions
and develop electrochemical sensor parameters for their detection. |
|
Measure drug diffusion |
Use calibrated electrochemical drug sensors and
diffusion cells to measure transport of drugs through silicone membranes. |
|
Synthesize pro-drug compounds |
Using organic chemistry techniques, prepare
pro-drug compounds that will model the drug attached to a silicone rubber. |
|
Study pro-drug kinetics at variable pH |
Expose purified pro-drugs to variable pH solutions
and determine rate of cleavage to drug. |
[1] Persky, A. M.; Hochhaus, G.; Brazeau, G. A. J. Chromatogr. 2003,
794, 157-165.
[2] Dunnett, M.; Harris, R. C.; Orme,
C. E. Scand. J. Clin.
Lab. Invest. 1991, 51, 137-141.
[3] Bottomley,
P. A.; Lee, Y. H.; Weiss, R. G. Radiology
1997, 204, 403-410.
[4]
Rawson, E. E.; Clarkson, P. M.; Price, T. B.; Miles, M. P. Acta. Physiol. Scand. 2002, 174, 57-65.
[5] Tombach, B; Schneider, J.; Matzkies,
F.; Schaefer, R. M.; Chenitius, G. C. Clinica. Chimica. Acta. 2001, 312, 129-134.
[6] Erlenkotter,
A.; Fobker, M.; Chemnitius,
G. C. Anal. Bioanal. Chem. 2002, 372, 284-292.
[7]
Varghese, M. C.; Balin, A. K.; Carter, D. M., et
al. Arch Dermatol. 1986, 122,
52.
[8] Eisinger, M.; Lee, J. S.; Hefton,
J. M., et al. Proc Natl Acad
Sci. 1979, 76, 5340.
[9] Blank, I.H. J Invest Dermatol. 1939, 2, 75.